Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gm5640A3KG49 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.26■□□□□ 0.67
Gm5640A3KG49 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm5640A3KG49 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.25■□□□□ 0.67
Gm5640A3KG49 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm5640A3KG49 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5640A3KG49 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5640A3KG49 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5640A3KG49 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Gm5640A3KG49 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5640A3KG49 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.24■□□□□ 0.67
Gm5640A3KG49 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5640A3KG49 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5640A3KG49 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5640A3KG49 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.23■□□□□ 0.67
Gm5640A3KG49 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gm5640A3KG49 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.22■□□□□ 0.67
Gm5640A3KG49 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.22■□□□□ 0.67
Gm5640A3KG49 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.22■□□□□ 0.67
Gm5640A3KG49 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5640A3KG49 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.22■□□□□ 0.67
Gm5640A3KG49 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5640A3KG49 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5640A3KG49 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5640A3KG49 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.22■□□□□ 0.67
Gm5640A3KG49 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5640A3KG49 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gm5640A3KG49 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Gm5640A3KG49 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5640A3KG49 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5640A3KG49 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5640A3KG49 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5640A3KG49 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.2■□□□□ 0.66
Gm5640A3KG49 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gm5640A3KG49 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5640A3KG49 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 349.8 ms