Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv1-88A0A140T8N1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv1-88A0A140T8N1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv1-88A0A140T8N1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv1-88A0A140T8N1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv1-88A0A140T8N1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv1-88A0A140T8N1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv1-88A0A140T8N1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv1-88A0A140T8N1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv1-88A0A140T8N1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv1-88A0A140T8N1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Igkv1-88A0A140T8N1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms