Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 BC021767-201ENSMUST00000126387 1716 ntBASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gm10849-201ENSMUST00000100397 618 ntBASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gm18671-201ENSMUST00000214826 683 ntBASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv12-1A0A0B4J1H0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trbv12-1A0A0B4J1H0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.77■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 AV356131-201ENSMUST00000206201 750 ntBASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms