Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.77■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.77■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.77■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv3-4A0A0A6YXF1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.77■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm5643-201ENSMUST00000117081 966 ntBASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm22325-201ENSMUST00000158904 308 ntBASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.73■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm6576-201ENSMUST00000169678 883 ntBASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms