Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-9A0A0A6YW37 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Ighv1-9A0A0A6YW37 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Ighv1-9A0A0A6YW37 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ighv1-9A0A0A6YW37 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-9A0A0A6YW37 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Gm13241-201ENSMUST00000094493 780 ntBASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-9A0A0A6YW37 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-9A0A0A6YW37 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-9A0A0A6YW37 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-9A0A0A6YW37 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-9A0A0A6YW37 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-9A0A0A6YW37 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-9A0A0A6YW37 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-9A0A0A6YW37 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms