Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Gm9870-201ENSMUST00000063874 645 ntBASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13-2A0A075B649 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-2A0A075B649 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-2A0A075B649 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-2A0A075B649 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-2A0A075B649 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-2A0A075B649 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-2A0A075B649 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav13-2A0A075B649 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-2A0A075B649 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-2A0A075B649 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-2A0A075B649 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-2A0A075B649 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-2A0A075B649 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-2A0A075B649 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-2A0A075B649 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-2A0A075B649 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 AA386476-201ENSMUST00000098781 1665 ntBASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-2A0A075B649 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms