Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12-3A0A075B648 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12-3A0A075B648 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav12-3A0A075B648 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav12-3A0A075B648 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav12-3A0A075B648 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav12-3A0A075B648 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
Trav12-3A0A075B648 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav12-3A0A075B648 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms