Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12n-2A0A075B626 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trav12n-2A0A075B626 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12n-2A0A075B626 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Gm42569-201ENSMUST00000200539 472 ntBASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12n-2A0A075B626 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav12n-2A0A075B626 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12n-2A0A075B626 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12n-2A0A075B626 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12n-2A0A075B626 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12n-2A0A075B626 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12n-2A0A075B626 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav12n-2A0A075B626 Gm13534-201ENSMUST00000121169 513 ntBASIC17.02■□□□□ 0.32
Trav12n-2A0A075B626 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12n-2A0A075B626 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12n-2A0A075B626 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12n-2A0A075B626 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12n-2A0A075B626 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12n-2A0A075B626 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12n-2A0A075B626 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12n-2A0A075B626 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12n-2A0A075B626 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trav12n-2A0A075B626 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12n-2A0A075B626 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav12n-2A0A075B626 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12n-2A0A075B626 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Trav12n-2A0A075B626 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17■□□□□ 0.31
Trav12n-2A0A075B626 Gm7514-201ENSMUST00000209475 934 ntBASIC17■□□□□ 0.31
Trav12n-2A0A075B626 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12n-2A0A075B626 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12n-2A0A075B626 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17■□□□□ 0.31
Trav12n-2A0A075B626 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
Trav12n-2A0A075B626 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12n-2A0A075B626 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12n-2A0A075B626 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12n-2A0A075B626 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12n-2A0A075B626 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms