Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-54A0A075B5W5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-54A0A075B5W5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-54A0A075B5W5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-54A0A075B5W5 Gm42778-201ENSMUST00000199644 553 ntBASIC16.94■□□□□ 0.3
Ighv1-54A0A075B5W5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-54A0A075B5W5 Gm5874-201ENSMUST00000096101 508 ntBASIC16.94■□□□□ 0.3
Ighv1-54A0A075B5W5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-54A0A075B5W5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Iqck-206ENSMUST00000208658 2891 ntBASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-54A0A075B5W5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ighv1-54A0A075B5W5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-54A0A075B5W5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ighv1-54A0A075B5W5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-54A0A075B5W5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.91■□□□□ 0.3
Ighv1-54A0A075B5W5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-54A0A075B5W5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-54A0A075B5W5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-54A0A075B5W5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-54A0A075B5W5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ighv1-54A0A075B5W5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ighv1-54A0A075B5W5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Gm42642-201ENSMUST00000200683 355 ntBASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Gm10033-202ENSMUST00000211874 928 ntBASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-54A0A075B5W5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ighv1-54A0A075B5W5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.87■□□□□ 0.29
Ighv1-54A0A075B5W5 Gm13534-201ENSMUST00000121169 513 ntBASIC16.87■□□□□ 0.29
Ighv1-54A0A075B5W5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-54A0A075B5W5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ighv1-54A0A075B5W5 Gm8495-201ENSMUST00000188740 694 ntBASIC16.87■□□□□ 0.29
Ighv1-54A0A075B5W5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms