Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb2S4R1M3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb2S4R1M3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb2S4R1M3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb2S4R1M3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb2S4R1M3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb2S4R1M3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb2S4R1M3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb2S4R1M3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.01■□□□□ 0.63
H2afb2S4R1M3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb2S4R1M3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19■□□□□ 0.63
H2afb2S4R1M3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb2S4R1M3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb2S4R1M3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
H2afb2S4R1M3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
H2afb2S4R1M3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb2S4R1M3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb2S4R1M3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19■□□□□ 0.63
H2afb2S4R1M3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
H2afb2S4R1M3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb2S4R1M3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.98■□□□□ 0.63
H2afb2S4R1M3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.98■□□□□ 0.63
H2afb2S4R1M3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb2S4R1M3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb2S4R1M3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms