Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Crlf3Q9Z2L7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.18■□□□□ 0.66
Crlf3Q9Z2L7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Crlf3Q9Z2L7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Crlf3Q9Z2L7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Crlf3Q9Z2L7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Crlf3Q9Z2L7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Crlf3Q9Z2L7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Crlf3Q9Z2L7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms