Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn6Q9Z262 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn6Q9Z262 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Gm43060-201ENSMUST00000200621 289 ntBASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn6Q9Z262 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cldn6Q9Z262 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn6Q9Z262 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Gm7860-201ENSMUST00000121190 879 ntBASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn6Q9Z262 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn6Q9Z262 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Golph3-205ENSMUST00000228671 2842 ntBASIC17.77■□□□□ 0.44
Cldn6Q9Z262 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn6Q9Z262 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cldn6Q9Z262 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms