Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClcnkaQ9WUB7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Gm43060-201ENSMUST00000200621 289 ntBASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClcnkaQ9WUB7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ClcnkaQ9WUB7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClcnkaQ9WUB7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Gm27801-201ENSMUST00000184174 223 ntBASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClcnkaQ9WUB7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ClcnkaQ9WUB7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClcnkaQ9WUB7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ClcnkaQ9WUB7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms