Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RpgrQ9R0X5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RpgrQ9R0X5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RpgrQ9R0X5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RpgrQ9R0X5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RpgrQ9R0X5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Golph3-205ENSMUST00000228671 2842 ntBASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RpgrQ9R0X5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms