Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.44■□□□□ 0.86
CCM2LQ9NUG4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCM2LQ9NUG4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2LQ9NUG4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCM2LQ9NUG4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 AC092667.1-201ENST00000434301 2586 ntBASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 FP325331.1-202ENST00000623531 1380 ntBASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCM2LQ9NUG4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 AL356740.2-201ENST00000601559 647 ntBASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 CA15P2-201ENST00000611168 834 ntBASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 AF106564.1-201ENST00000607058 2553 ntBASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2LQ9NUG4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 MIR4281-201ENST00000580852 62 ntBASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 MIR6724-1-201ENST00000616420 92 ntBASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 MIR6724-2-201ENST00000616483 92 ntBASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 MIR6724-4-201ENST00000617390 92 ntBASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 MIR6724-3-201ENST00000622482 92 ntBASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCM2LQ9NUG4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 MTDHP2-201ENST00000601468 714 ntBASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2LQ9NUG4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CCM2LQ9NUG4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCM2LQ9NUG4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 AC133561.4-201ENST00000566112 224 ntBASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 RARRES2P6-201ENST00000567333 442 ntBASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 MIR4466-201ENST00000606121 54 ntBASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.39■□□□□ 0.85
CCM2LQ9NUG4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.38■□□□□ 0.85
CCM2LQ9NUG4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms