Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
Nup50Q9JIH2 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.14■□□□□ 0.82
Nup50Q9JIH2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nup50Q9JIH2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup50Q9JIH2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup50Q9JIH2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup50Q9JIH2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup50Q9JIH2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.12■□□□□ 0.81
Nup50Q9JIH2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup50Q9JIH2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Nup50Q9JIH2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup50Q9JIH2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nup50Q9JIH2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nup50Q9JIH2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nup50Q9JIH2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Nup50Q9JIH2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.11■□□□□ 0.81
Nup50Q9JIH2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.11■□□□□ 0.81
Nup50Q9JIH2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nup50Q9JIH2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nup50Q9JIH2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nup50Q9JIH2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nup50Q9JIH2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Gm11421-201ENSMUST00000122124 294 ntBASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nup50Q9JIH2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nup50Q9JIH2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nup50Q9JIH2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nup50Q9JIH2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nup50Q9JIH2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nup50Q9JIH2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nup50Q9JIH2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nup50Q9JIH2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nup50Q9JIH2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Gm7860-201ENSMUST00000121190 879 ntBASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup50Q9JIH2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms