Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 RARRES2P11-201ENST00000635158 484 ntBASIC23.59■■□□□ 1.37
RNF39Q9H2S5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF39Q9H2S5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 AP004607.4-201ENST00000530158 1459 ntBASIC23.58■■□□□ 1.37
RNF39Q9H2S5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
RNF39Q9H2S5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 AC004854.2-201ENST00000608450 1441 ntBASIC23.57■■□□□ 1.36
RNF39Q9H2S5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
RNF39Q9H2S5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF39Q9H2S5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 AC090192.1-201ENST00000517740 490 ntBASIC23.55■■□□□ 1.36
RNF39Q9H2S5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF39Q9H2S5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 AC107308.1-201ENST00000615897 301 ntBASIC23.54■■□□□ 1.36
RNF39Q9H2S5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF39Q9H2S5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.53■■□□□ 1.36
RNF39Q9H2S5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF39Q9H2S5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF39Q9H2S5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF39Q9H2S5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF39Q9H2S5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF39Q9H2S5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
RNF39Q9H2S5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
RNF39Q9H2S5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.52■■□□□ 1.36
RNF39Q9H2S5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms