Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg3Q9CQV4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Gm10849-201ENSMUST00000100397 618 ntBASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Reep4-203ENSMUST00000226563 1444 ntBASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg3Q9CQV4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg3Q9CQV4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Gm9988-201ENSMUST00000069786 435 ntBASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg3Q9CQV4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg3Q9CQV4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retreg3Q9CQV4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg3Q9CQV4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retreg3Q9CQV4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retreg3Q9CQV4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retreg3Q9CQV4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retreg3Q9CQV4 Gm26571-201ENSMUST00000181399 666 ntBASIC19.1■□□□□ 0.65
Retreg3Q9CQV4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.1■□□□□ 0.65
Retreg3Q9CQV4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retreg3Q9CQV4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retreg3Q9CQV4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retreg3Q9CQV4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retreg3Q9CQV4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retreg3Q9CQV4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Retreg3Q9CQV4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retreg3Q9CQV4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms