Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Tpgs1Q99MS8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tpgs1Q99MS8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.91■□□□□ 0.78
Tpgs1Q99MS8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tpgs1Q99MS8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tpgs1Q99MS8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tpgs1Q99MS8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tpgs1Q99MS8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Tpgs1Q99MS8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tpgs1Q99MS8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Tpgs1Q99MS8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tpgs1Q99MS8 Gm26571-201ENSMUST00000181399 666 ntBASIC19.89■□□□□ 0.77
Tpgs1Q99MS8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tpgs1Q99MS8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tpgs1Q99MS8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Tpgs1Q99MS8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Tpgs1Q99MS8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpgs1Q99MS8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpgs1Q99MS8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.85■□□□□ 0.77
Tpgs1Q99MS8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Gm42569-201ENSMUST00000200539 472 ntBASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Gm7514-201ENSMUST00000209475 934 ntBASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpgs1Q99MS8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpgs1Q99MS8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpgs1Q99MS8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpgs1Q99MS8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpgs1Q99MS8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpgs1Q99MS8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpgs1Q99MS8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpgs1Q99MS8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpgs1Q99MS8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms