Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trps1Q925H1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trps1Q925H1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Trps1Q925H1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.78■□□□□ 0.76
Trps1Q925H1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trps1Q925H1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.78■□□□□ 0.76
Trps1Q925H1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trps1Q925H1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trps1Q925H1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trps1Q925H1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trps1Q925H1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trps1Q925H1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trps1Q925H1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trps1Q925H1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.76■□□□□ 0.75
Trps1Q925H1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.76■□□□□ 0.75
Trps1Q925H1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trps1Q925H1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trps1Q925H1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trps1Q925H1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trps1Q925H1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trps1Q925H1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trps1Q925H1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trps1Q925H1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trps1Q925H1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trps1Q925H1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trps1Q925H1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trps1Q925H1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trps1Q925H1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Gm38205-201ENSMUST00000192243 258 ntBASIC19.74■□□□□ 0.75
Trps1Q925H1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trps1Q925H1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.74■□□□□ 0.75
Trps1Q925H1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Trps1Q925H1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trps1Q925H1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trps1Q925H1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trps1Q925H1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trps1Q925H1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trps1Q925H1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trps1Q925H1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trps1Q925H1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trps1Q925H1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.72■□□□□ 0.75
Trps1Q925H1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.72■□□□□ 0.75
Trps1Q925H1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.72■□□□□ 0.75
Trps1Q925H1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Trps1Q925H1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trps1Q925H1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trps1Q925H1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trps1Q925H1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.71■□□□□ 0.75
Trps1Q925H1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trps1Q925H1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trps1Q925H1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trps1Q925H1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trps1Q925H1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.7■□□□□ 0.74
Trps1Q925H1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trps1Q925H1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trps1Q925H1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.7■□□□□ 0.74
Trps1Q925H1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms