Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhgb4Q91XX6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Pcdhgb4Q91XX6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb4Q91XX6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb4Q91XX6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb4Q91XX6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb4Q91XX6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb4Q91XX6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb4Q91XX6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb4Q91XX6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb4Q91XX6 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Gm43017-201ENSMUST00000198296 752 ntBASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Gm40848-201ENSMUST00000221998 324 ntBASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb4Q91XX6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb4Q91XX6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb4Q91XX6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb4Q91XX6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb4Q91XX6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb4Q91XX6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdhgb4Q91XX6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb4Q91XX6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb4Q91XX6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb4Q91XX6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb4Q91XX6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb4Q91XX6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb4Q91XX6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Pcdhgb4Q91XX6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb4Q91XX6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb4Q91XX6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgb4Q91XX6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgb4Q91XX6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.08■□□□□ 0.8
Pcdhgb4Q91XX6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgb4Q91XX6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb4Q91XX6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 BC021767-201ENSMUST00000126387 1716 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms