Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Gm26571-201ENSMUST00000181399 666 ntBASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4aQ8VEJ9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4aQ8VEJ9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.35■□□□□ 0.53
Vps4aQ8VEJ9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4aQ8VEJ9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps4aQ8VEJ9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4aQ8VEJ9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4aQ8VEJ9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Vps4aQ8VEJ9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4aQ8VEJ9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4aQ8VEJ9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps4aQ8VEJ9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps4aQ8VEJ9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps4aQ8VEJ9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Gm37179-201ENSMUST00000194862 823 ntBASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4aQ8VEJ9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps4aQ8VEJ9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 Gm27011-201ENSMUST00000182352 972 ntBASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4aQ8VEJ9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms