Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rprd1aQ8VDS4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rprd1aQ8VDS4 Gm10849-201ENSMUST00000100397 618 ntBASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rprd1aQ8VDS4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rprd1aQ8VDS4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rprd1aQ8VDS4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rprd1aQ8VDS4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rprd1aQ8VDS4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rprd1aQ8VDS4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rprd1aQ8VDS4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rprd1aQ8VDS4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rprd1aQ8VDS4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.53■□□□□ 0.72
Rprd1aQ8VDS4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rprd1aQ8VDS4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rprd1aQ8VDS4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rprd1aQ8VDS4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rprd1aQ8VDS4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rprd1aQ8VDS4 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Gm27405-201ENSMUST00000184201 112 ntBASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rprd1aQ8VDS4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Rprd1aQ8VDS4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rprd1aQ8VDS4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rprd1aQ8VDS4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rprd1aQ8VDS4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rprd1aQ8VDS4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Rprd1aQ8VDS4 Gm7291-201ENSMUST00000199147 382 ntBASIC19.51■□□□□ 0.71
Rprd1aQ8VDS4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rprd1aQ8VDS4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rprd1aQ8VDS4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Gm13146-201ENSMUST00000118508 780 ntBASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rprd1aQ8VDS4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rprd1aQ8VDS4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 254 ms