Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Serp2-204ENSMUST00000228055 705 ntBASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb7Q8CDY9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb7Q8CDY9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb7Q8CDY9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb7Q8CDY9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb7Q8CDY9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.05■□□□□ 0.64
Pcdhb7Q8CDY9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb7Q8CDY9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb7Q8CDY9 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb7Q8CDY9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb7Q8CDY9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb7Q8CDY9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb7Q8CDY9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Smad6-203ENSMUST00000179458 273 ntBASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb7Q8CDY9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb7Q8CDY9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms