Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh19Q80TF3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh19Q80TF3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.66■□□□□ 0.58
Pcdh19Q80TF3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh19Q80TF3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh19Q80TF3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Gm7290-201ENSMUST00000104990 617 ntBASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Gm12918-201ENSMUST00000120234 636 ntBASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Gm15710-201ENSMUST00000121821 636 ntBASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Gm5075-201ENSMUST00000196916 622 ntBASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh19Q80TF3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms