Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
H3F3CQ6NXT2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 AC055733.4-201ENST00000638462 1354 ntBASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 LINC00526-201ENST00000581067 1875 ntBASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H3F3CQ6NXT2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 OR7E47P-201ENST00000546390 1422 ntBASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 AC137761.2-201ENST00000561729 223 ntBASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 AC145350.3-201ENST00000569033 163 ntBASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 AC087742.1-201ENST00000575880 1738 ntBASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
H3F3CQ6NXT2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.88■□□□□ 0.77
H3F3CQ6NXT2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 AC016769.1-201ENST00000409132 1010 ntBASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 AP004607.7-201ENST00000527152 1677 ntBASIC19.87■□□□□ 0.77
H3F3CQ6NXT2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 KRT87P-202ENST00000534226 1464 ntBASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 AL034346.1-201ENST00000568244 1277 ntBASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 DUSP8P5-201ENST00000422884 1815 ntBASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3CQ6NXT2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms