Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cnga4Q3UW12 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnga4Q3UW12 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cnga4Q3UW12 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnga4Q3UW12 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnga4Q3UW12 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnga4Q3UW12 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cnga4Q3UW12 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.33■□□□□ 0.68
Cnga4Q3UW12 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnga4Q3UW12 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.31■□□□□ 0.68
Cnga4Q3UW12 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnga4Q3UW12 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cnga4Q3UW12 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.3■□□□□ 0.68
Cnga4Q3UW12 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.29■□□□□ 0.68
Cnga4Q3UW12 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnga4Q3UW12 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnga4Q3UW12 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms