Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn18P56857 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cldn18P56857 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn18P56857 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn18P56857 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Cldn18P56857 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn18P56857 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn18P56857 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn18P56857 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn18P56857 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.08■□□□□ 0.32
Cldn18P56857 Gm10033-202ENSMUST00000211874 928 ntBASIC17.08■□□□□ 0.32
Cldn18P56857 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.08■□□□□ 0.32
Cldn18P56857 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.08■□□□□ 0.32
Cldn18P56857 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.08■□□□□ 0.32
Cldn18P56857 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn18P56857 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn18P56857 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cldn18P56857 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn18P56857 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.07■□□□□ 0.32
Cldn18P56857 Gm13146-201ENSMUST00000118508 780 ntBASIC17.07■□□□□ 0.32
Cldn18P56857 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn18P56857 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn18P56857 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn18P56857 Gm42642-201ENSMUST00000200683 355 ntBASIC17.07■□□□□ 0.32
Cldn18P56857 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn18P56857 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn18P56857 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn18P56857 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn18P56857 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn18P56857 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cldn18P56857 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.06■□□□□ 0.32
Cldn18P56857 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.06■□□□□ 0.32
Cldn18P56857 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn18P56857 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn18P56857 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn18P56857 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn18P56857 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn18P56857 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cldn18P56857 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn18P56857 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.05■□□□□ 0.32
Cldn18P56857 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.05■□□□□ 0.32
Cldn18P56857 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.05■□□□□ 0.32
Cldn18P56857 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.05■□□□□ 0.32
Cldn18P56857 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn18P56857 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cldn18P56857 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn18P56857 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn18P56857 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn18P56857 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn18P56857 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn18P56857 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
Cldn18P56857 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cldn18P56857 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn18P56857 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn18P56857 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Cldn18P56857 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn18P56857 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn18P56857 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn18P56857 Gm26571-201ENSMUST00000181399 666 ntBASIC17.03■□□□□ 0.32
Cldn18P56857 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.03■□□□□ 0.32
Cldn18P56857 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.03■□□□□ 0.32
Cldn18P56857 Gm18671-201ENSMUST00000214826 683 ntBASIC17.03■□□□□ 0.32
Cldn18P56857 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn18P56857 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn18P56857 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn18P56857 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn18P56857 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn18P56857 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn18P56857 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn18P56857 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn18P56857 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.01■□□□□ 0.31
Cldn18P56857 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.01■□□□□ 0.31
Cldn18P56857 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn18P56857 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms