Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Hmgcs2P54869 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.32■■□□□ 1
Hmgcs2P54869 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.32■■□□□ 1
Hmgcs2P54869 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.32■■□□□ 1
Hmgcs2P54869 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.32■■□□□ 1
Hmgcs2P54869 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Hmgcs2P54869 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.31■■□□□ 1
Hmgcs2P54869 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Hmgcs2P54869 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.31■■□□□ 1
Hmgcs2P54869 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.31■■□□□ 1
Hmgcs2P54869 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcs2P54869 Mir7071-201ENSMUST00000184847 69 ntBASIC21.31■■□□□ 1
Hmgcs2P54869 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Hmgcs2P54869 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Hmgcs2P54869 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Hmgcs2P54869 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hmgcs2P54869 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.3■■□□□ 1
Hmgcs2P54869 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.3■■□□□ 1
Hmgcs2P54869 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Hmgcs2P54869 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgcs2P54869 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hmgcs2P54869 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgcs2P54869 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Hmgcs2P54869 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcs2P54869 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hmgcs2P54869 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Hmgcs2P54869 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcs2P54869 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgcs2P54869 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.27■■□□□ 1
Hmgcs2P54869 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hmgcs2P54869 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hmgcs2P54869 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.27■□□□□ 0.99
Hmgcs2P54869 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Gm2559-201ENSMUST00000201323 363 ntBASIC21.26■□□□□ 0.99
Hmgcs2P54869 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcs2P54869 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Mir6982-201ENSMUST00000184354 68 ntBASIC21.25■□□□□ 0.99
Hmgcs2P54869 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Hmgcs2P54869 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms