Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LIMK2P53671 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.72■■□□□ 1.07
LIMK2P53671 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
LIMK2P53671 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.71■■□□□ 1.07
LIMK2P53671 FAM99A-202ENST00000538190 1989 ntBASIC21.71■■□□□ 1.07
LIMK2P53671 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LIMK2P53671 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.71■■□□□ 1.07
LIMK2P53671 MIR5787-201ENST00000611784 55 ntBASIC21.71■■□□□ 1.07
LIMK2P53671 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
LIMK2P53671 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.71■■□□□ 1.07
LIMK2P53671 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LIMK2P53671 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LIMK2P53671 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LIMK2P53671 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.7■■□□□ 1.07
LIMK2P53671 AL137060.1-201ENST00000618151 2648 ntBASIC21.7■■□□□ 1.06
LIMK2P53671 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.7■■□□□ 1.06
LIMK2P53671 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.7■■□□□ 1.06
LIMK2P53671 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.7■■□□□ 1.06
LIMK2P53671 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LIMK2P53671 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LIMK2P53671 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LIMK2P53671 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LIMK2P53671 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LIMK2P53671 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
LIMK2P53671 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LIMK2P53671 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LIMK2P53671 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LIMK2P53671 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
LIMK2P53671 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LIMK2P53671 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.69■■□□□ 1.06
LIMK2P53671 BX842568.3-201ENST00000418104 571 ntBASIC21.68■■□□□ 1.06
LIMK2P53671 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.68■■□□□ 1.06
LIMK2P53671 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.68■■□□□ 1.06
LIMK2P53671 AC233992.3-201ENST00000607491 485 ntBASIC21.68■■□□□ 1.06
LIMK2P53671 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LIMK2P53671 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LIMK2P53671 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
LIMK2P53671 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LIMK2P53671 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LIMK2P53671 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LIMK2P53671 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.68■■□□□ 1.06
LIMK2P53671 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LIMK2P53671 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LIMK2P53671 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
LIMK2P53671 MIR6821-201ENST00000617625 74 ntBASIC21.67■■□□□ 1.06
LIMK2P53671 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
LIMK2P53671 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LIMK2P53671 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LIMK2P53671 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LIMK2P53671 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.66■■□□□ 1.06
LIMK2P53671 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.66■■□□□ 1.06
LIMK2P53671 IRS3P-201ENST00000223076 1006 ntBASIC21.66■■□□□ 1.06
LIMK2P53671 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LIMK2P53671 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.66■■□□□ 1.06
LIMK2P53671 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.66■■□□□ 1.06
LIMK2P53671 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.66■■□□□ 1.06
LIMK2P53671 AL031602.1-201ENST00000633169 911 ntBASIC21.66■■□□□ 1.06
LIMK2P53671 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
LIMK2P53671 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.66■■□□□ 1.06
LIMK2P53671 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.66■■□□□ 1.06
LIMK2P53671 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.66■■□□□ 1.06
LIMK2P53671 AC026310.3-201ENST00000625186 2373 ntBASIC21.66■■□□□ 1.06
LIMK2P53671 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LIMK2P53671 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LIMK2P53671 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LIMK2P53671 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LIMK2P53671 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.65■■□□□ 1.06
LIMK2P53671 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
LIMK2P53671 pRNA.6-201ENST00000610482 90 ntBASIC21.65■■□□□ 1.06
LIMK2P53671 pRNA.5-201ENST00000612139 90 ntBASIC21.65■■□□□ 1.06
LIMK2P53671 AC092666.2-201ENST00000613287 246 ntBASIC21.65■■□□□ 1.06
LIMK2P53671 pRNA.11-201ENST00000618423 90 ntBASIC21.65■■□□□ 1.06
LIMK2P53671 pRNA.13-201ENST00000619112 90 ntBASIC21.65■■□□□ 1.06
LIMK2P53671 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.65■■□□□ 1.06
LIMK2P53671 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LIMK2P53671 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LIMK2P53671 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
LIMK2P53671 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LIMK2P53671 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LIMK2P53671 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LIMK2P53671 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LIMK2P53671 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms