Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a13P31649 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a13P31649 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a13P31649 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Slc6a13P31649 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Slc6a13P31649 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.37■□□□□ 0.69
Slc6a13P31649 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Slc6a13P31649 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a13P31649 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Slc6a13P31649 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.36■□□□□ 0.69
Slc6a13P31649 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Slc6a13P31649 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a13P31649 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 Gm15039-201ENSMUST00000118914 875 ntBASIC19.35■□□□□ 0.69
Slc6a13P31649 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Slc6a13P31649 Gm10493-201ENSMUST00000097270 612 ntBASIC19.35■□□□□ 0.69
Slc6a13P31649 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a13P31649 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a13P31649 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a13P31649 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a13P31649 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a13P31649 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a13P31649 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a13P31649 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a13P31649 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a13P31649 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a13P31649 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.34■□□□□ 0.69
Slc6a13P31649 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a13P31649 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc6a13P31649 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a13P31649 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a13P31649 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a13P31649 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.33■□□□□ 0.68
Slc6a13P31649 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.33■□□□□ 0.68
Slc6a13P31649 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.33■□□□□ 0.68
Slc6a13P31649 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a13P31649 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a13P31649 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a13P31649 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Slc6a13P31649 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a13P31649 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a13P31649 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.32■□□□□ 0.68
Slc6a13P31649 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a13P31649 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.32■□□□□ 0.68
Slc6a13P31649 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.32■□□□□ 0.68
Slc6a13P31649 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.32■□□□□ 0.68
Slc6a13P31649 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.32■□□□□ 0.68
Slc6a13P31649 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a13P31649 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a13P31649 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.31■□□□□ 0.68
Slc6a13P31649 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Slc6a13P31649 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.31■□□□□ 0.68
Slc6a13P31649 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Slc6a13P31649 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.31■□□□□ 0.68
Slc6a13P31649 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a13P31649 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Slc6a13P31649 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slc6a13P31649 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slc6a13P31649 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a13P31649 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a13P31649 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a13P31649 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Slc6a13P31649 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a13P31649 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a13P31649 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms