Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nedd8P29595 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Nedd8P29595 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nedd8P29595 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nedd8P29595 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.66■□□□□ 0.42
Nedd8P29595 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nedd8P29595 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nedd8P29595 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nedd8P29595 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nedd8P29595 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nedd8P29595 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nedd8P29595 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.65■□□□□ 0.42
Nedd8P29595 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.65■□□□□ 0.42
Nedd8P29595 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.65■□□□□ 0.42
Nedd8P29595 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nedd8P29595 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nedd8P29595 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.65■□□□□ 0.42
Nedd8P29595 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.65■□□□□ 0.42
Nedd8P29595 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nedd8P29595 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nedd8P29595 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nedd8P29595 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nedd8P29595 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nedd8P29595 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nedd8P29595 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nedd8P29595 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Nedd8P29595 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nedd8P29595 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nedd8P29595 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nedd8P29595 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nedd8P29595 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nedd8P29595 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nedd8P29595 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nedd8P29595 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nedd8P29595 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nedd8P29595 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nedd8P29595 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nedd8P29595 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nedd8P29595 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nedd8P29595 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nedd8P29595 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Nedd8P29595 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nedd8P29595 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.61■□□□□ 0.41
Nedd8P29595 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Nedd8P29595 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Nedd8P29595 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nedd8P29595 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nedd8P29595 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nedd8P29595 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.61■□□□□ 0.41
Nedd8P29595 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.61■□□□□ 0.41
Nedd8P29595 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nedd8P29595 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nedd8P29595 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nedd8P29595 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nedd8P29595 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nedd8P29595 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nedd8P29595 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nedd8P29595 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.6■□□□□ 0.41
Nedd8P29595 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.6■□□□□ 0.41
Nedd8P29595 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nedd8P29595 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nedd8P29595 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nedd8P29595 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms