Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
MMP11P24347 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP11P24347 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
MMP11P24347 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 AC127496.7-201ENST00000625110 1798 ntBASIC20.46■□□□□ 0.87
MMP11P24347 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MMP11P24347 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MMP11P24347 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MMP11P24347 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP11P24347 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 ESRRAP2-201ENST00000418437 1549 ntBASIC20.45■□□□□ 0.86
MMP11P24347 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP11P24347 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP11P24347 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
MMP11P24347 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.44■□□□□ 0.86
MMP11P24347 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
MMP11P24347 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.44■□□□□ 0.86
MMP11P24347 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.44■□□□□ 0.86
MMP11P24347 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.44■□□□□ 0.86
MMP11P24347 NTF6G-201ENST00000591094 616 ntBASIC20.44■□□□□ 0.86
MMP11P24347 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
MMP11P24347 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MMP11P24347 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP11P24347 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.43■□□□□ 0.86
MMP11P24347 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP11P24347 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP11P24347 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP11P24347 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
MMP11P24347 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MMP11P24347 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP11P24347 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.43■□□□□ 0.86
MMP11P24347 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MMP11P24347 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP11P24347 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP11P24347 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP11P24347 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.43■□□□□ 0.86
MMP11P24347 AC242852.2-201ENST00000615738 1807 ntBASIC20.43■□□□□ 0.86
MMP11P24347 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP11P24347 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP11P24347 OXCT2P1-201ENST00000447263 1535 ntBASIC20.43■□□□□ 0.86
MMP11P24347 BX005040.4-201ENST00000637145 1518 ntBASIC20.43■□□□□ 0.86
MMP11P24347 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP11P24347 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.42■□□□□ 0.86
MMP11P24347 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.42■□□□□ 0.86
MMP11P24347 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP11P24347 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.42■□□□□ 0.86
MMP11P24347 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.42■□□□□ 0.86
MMP11P24347 TPRG1LP1-201ENST00000598702 760 ntBASIC20.42■□□□□ 0.86
MMP11P24347 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP11P24347 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MMP11P24347 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.41■□□□□ 0.86
MMP11P24347 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 SMUG1P1-201ENST00000590640 811 ntBASIC20.41■□□□□ 0.86
MMP11P24347 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.41■□□□□ 0.86
MMP11P24347 AL137784.2-201ENST00000607332 1000 ntBASIC20.41■□□□□ 0.86
MMP11P24347 IKBKGP1-201ENST00000612193 1073 ntBASIC20.41■□□□□ 0.86
MMP11P24347 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MMP11P24347 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP11P24347 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms