Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trim30aP15533 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trim30aP15533 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trim30aP15533 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30aP15533 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30aP15533 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30aP15533 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30aP15533 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30aP15533 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30aP15533 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30aP15533 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.98■□□□□ 0.95
Trim30aP15533 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim30aP15533 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.98■□□□□ 0.95
Trim30aP15533 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Trim30aP15533 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim30aP15533 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Gm7432-201ENSMUST00000210343 879 ntBASIC20.97■□□□□ 0.95
Trim30aP15533 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.97■□□□□ 0.95
Trim30aP15533 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.97■□□□□ 0.95
Trim30aP15533 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim30aP15533 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim30aP15533 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim30aP15533 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30aP15533 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim30aP15533 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30aP15533 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim30aP15533 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30aP15533 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim30aP15533 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim30aP15533 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim30aP15533 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim30aP15533 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim30aP15533 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim30aP15533 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim30aP15533 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30aP15533 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30aP15533 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim30aP15533 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30aP15533 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30aP15533 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30aP15533 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Trim30aP15533 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30aP15533 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.92■□□□□ 0.94
Trim30aP15533 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30aP15533 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim30aP15533 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim30aP15533 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim30aP15533 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.91■□□□□ 0.94
Trim30aP15533 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim30aP15533 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.91■□□□□ 0.94
Trim30aP15533 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim30aP15533 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30aP15533 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim30aP15533 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms