Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 SRC1YML034W 2505 nt2.79□□□□□ -1.96
RPL40BP0CH09 DRS2YAL026C 4068 nt2.78□□□□□ -1.96
RPL40BP0CH09 YIL175WYIL175W 318 nt2.78□□□□□ -1.96
RPL40BP0CH09 YJL222W-BYJL222W-B 138 nt2.78□□□□□ -1.96
RPL40BP0CH09 ICY1YMR195W 384 nt2.78□□□□□ -1.96
RPL40BP0CH09 YBL065WYBL065W 345 nt2.78□□□□□ -1.96
RPL40BP0CH09 YPL088WYPL088W 1029 nt2.78□□□□□ -1.96
RPL40BP0CH09 STT4YLR305C 5703 nt2.78□□□□□ -1.96
RPL40BP0CH09 MNR2YKL064W 2910 nt2.78□□□□□ -1.96
RPL40BP0CH09 PEP7YDR323C 1548 nt2.78□□□□□ -1.97
RPL40BP0CH09 GAS5YOL030W 1455 nt2.77□□□□□ -1.97
RPL40BP0CH09 BCH2YKR027W 2298 nt2.77□□□□□ -1.97
RPL40BP0CH09 KAP123YER110C 3342 nt2.77□□□□□ -1.97
RPL40BP0CH09 XRN1YGL173C 4587 nt2.77□□□□□ -1.97
RPL40BP0CH09 COS4YFL062W 1140 nt2.77□□□□□ -1.97
RPL40BP0CH09 YAE1YJR067C 426 nt2.77□□□□□ -1.97
RPL40BP0CH09 BET3YKR068C 582 nt2.77□□□□□ -1.97
RPL40BP0CH09 YLL037WYLL037W 381 nt2.77□□□□□ -1.97
RPL40BP0CH09 RPN13YLR421C 471 nt2.77□□□□□ -1.97
RPL40BP0CH09 ARG80YMR042W 534 nt2.77□□□□□ -1.97
RPL40BP0CH09 YMR294W-AYMR294W-A 360 nt2.77□□□□□ -1.97
RPL40BP0CH09 VPS21YOR089C 633 nt2.77□□□□□ -1.97
RPL40BP0CH09 RRG7YOR305W 729 nt2.77□□□□□ -1.97
RPL40BP0CH09 OXR1YPL196W 822 nt2.77□□□□□ -1.97
RPL40BP0CH09 SNQ2YDR011W 4506 nt2.76□□□□□ -1.97
RPL40BP0CH09 YPL109CYPL109C 1974 nt2.76□□□□□ -1.97
RPL40BP0CH09 PCI8YIL071C 1335 nt2.76□□□□□ -1.97
RPL40BP0CH09 APL4YPR029C 2499 nt2.76□□□□□ -1.97
RPL40BP0CH09 ALO1YML086C 1581 nt2.76□□□□□ -1.97
RPL40BP0CH09 RTT103YDR289C 1230 nt2.76□□□□□ -1.97
RPL40BP0CH09 UBC6YER100W 753 nt2.76□□□□□ -1.97
RPL40BP0CH09 COS3YML132W 1140 nt2.76□□□□□ -1.97
RPL40BP0CH09 COS2YBR302C 1140 nt2.76□□□□□ -1.97
RPL40BP0CH09 MET10YFR030W 3108 nt2.76□□□□□ -1.97
RPL40BP0CH09 ENT1YDL161W 1365 nt2.75□□□□□ -1.97
RPL40BP0CH09 YDR537CYDR537C 606 nt2.75□□□□□ -1.97
RPL40BP0CH09 PTI1YGR156W 1278 nt2.75□□□□□ -1.97
RPL40BP0CH09 tQ(UUG)BtQ(UUG)B 72 nt2.75□□□□□ -1.97
RPL40BP0CH09 SEC14YMR079W 915 nt2.75□□□□□ -1.97
RPL40BP0CH09 YPR136CYPR136C 513 nt2.75□□□□□ -1.97
RPL40BP0CH09 NEW1YPL226W 3591 nt2.75□□□□□ -1.97
RPL40BP0CH09 BUD4YJR092W 4344 nt2.74□□□□□ -1.97
RPL40BP0CH09 GSH2YOL049W 1476 nt2.74□□□□□ -1.97
RPL40BP0CH09 RPL13AYDL082W 600 nt2.74□□□□□ -1.97
RPL40BP0CH09 RRP1YDR087C 837 nt2.74□□□□□ -1.97
RPL40BP0CH09 STE14YDR410C 720 nt2.74□□□□□ -1.97
RPL40BP0CH09 YFL051CYFL051C 483 nt2.74□□□□□ -1.97
RPL40BP0CH09 YLR122CYLR122C 378 nt2.74□□□□□ -1.97
RPL40BP0CH09 YLR428CYLR428C 345 nt2.74□□□□□ -1.97
RPL40BP0CH09 TVP18YMR071C 504 nt2.74□□□□□ -1.97
RPL40BP0CH09 RPL20BYOR312C 519 nt2.74□□□□□ -1.97
RPL40BP0CH09 SIP1YDR422C 2448 nt2.74□□□□□ -1.97
RPL40BP0CH09 SCY1YGL083W 2415 nt2.74□□□□□ -1.97
RPL40BP0CH09 CWH41YGL027C 2502 nt2.74□□□□□ -1.97
RPL40BP0CH09 SUC2YIL162W 1599 nt2.74□□□□□ -1.97
RPL40BP0CH09 ZDS2YML109W 2829 nt2.73□□□□□ -1.97
RPL40BP0CH09 RDI1YDL135C 609 nt2.73□□□□□ -1.97
RPL40BP0CH09 YFR045WYFR045W 930 nt2.73□□□□□ -1.97
RPL40BP0CH09 ERP6YGL002W 651 nt2.73□□□□□ -1.97
RPL40BP0CH09 THP2YHR167W 786 nt2.73□□□□□ -1.97
RPL40BP0CH09 EMG1YLR186W 759 nt2.73□□□□□ -1.97
RPL40BP0CH09 BUD21YOR078W 645 nt2.73□□□□□ -1.97
RPL40BP0CH09 PRE2YPR103W 864 nt2.73□□□□□ -1.97
RPL40BP0CH09 RIB5YBR256C 717 nt2.73□□□□□ -1.97
RPL40BP0CH09 CHO2YGR157W 2610 nt2.73□□□□□ -1.97
RPL40BP0CH09 ERB1YMR049C 2424 nt2.73□□□□□ -1.97
RPL40BP0CH09 ATG32YIL146C 1590 nt2.73□□□□□ -1.97
RPL40BP0CH09 NMA111YNL123W 2994 nt2.73□□□□□ -1.97
RPL40BP0CH09 YDL241WYDL241W 372 nt2.72□□□□□ -1.97
RPL40BP0CH09 GPI8YDR331W 1236 nt2.72□□□□□ -1.97
RPL40BP0CH09 OSW5YMR148W 447 nt2.72□□□□□ -1.97
RPL40BP0CH09 SQS1YNL224C 2304 nt2.72□□□□□ -1.97
RPL40BP0CH09 TAF3YPL011C 1062 nt2.72□□□□□ -1.97
RPL40BP0CH09 YBR242WYBR242W 717 nt2.72□□□□□ -1.97
RPL40BP0CH09 SPO71YDR104C 3738 nt2.72□□□□□ -1.97
RPL40BP0CH09 SPO1YNL012W 1896 nt2.71□□□□□ -1.98
RPL40BP0CH09 CDH1YGL003C 1701 nt2.71□□□□□ -1.98
RPL40BP0CH09 YCR050CYCR050C 309 nt2.71□□□□□ -1.98
RPL40BP0CH09 RPL27AYHR010W 411 nt2.71□□□□□ -1.98
RPL40BP0CH09 YHR145CYHR145C 357 nt2.71□□□□□ -1.98
RPL40BP0CH09 AYR1YIL124W 894 nt2.71□□□□□ -1.98
RPL40BP0CH09 MMM1YLL006W 1281 nt2.71□□□□□ -1.98
RPL40BP0CH09 SMA2YML066C 1110 nt2.71□□□□□ -1.98
RPL40BP0CH09 IBD2YNL164C 1056 nt2.71□□□□□ -1.98
RPL40BP0CH09 OCT1YKL134C 2319 nt2.71□□□□□ -1.98
RPL40BP0CH09 PRR2YDL214C 2100 nt2.71□□□□□ -1.98
RPL40BP0CH09 UNG1YML021C 1080 nt2.7□□□□□ -1.98
RPL40BP0CH09 YAR1YPL239W 603 nt2.7□□□□□ -1.98
RPL40BP0CH09 YBR298C-AYBR298C-A 222 nt2.7□□□□□ -1.98
RPL40BP0CH09 YCL023CYCL023C 348 nt2.7□□□□□ -1.98
RPL40BP0CH09 UBP14YBR058C 2346 nt2.7□□□□□ -1.98
RPL40BP0CH09 SEC6YIL068C 2418 nt2.7□□□□□ -1.98
RPL40BP0CH09 TRE2YOR256C 2430 nt2.7□□□□□ -1.98
RPL40BP0CH09 LAP2YNL045W 2016 nt2.69□□□□□ -1.98
RPL40BP0CH09 JJJ1YNL227C 1773 nt2.69□□□□□ -1.98
RPL40BP0CH09 SPO14YKR031C 5052 nt2.69□□□□□ -1.98
RPL40BP0CH09 YKL091CYKL091C 933 nt2.69□□□□□ -1.98
RPL40BP0CH09 IDH2YOR136W 1110 nt2.69□□□□□ -1.98
RPL40BP0CH09 ROK1YGL171W 1695 nt2.69□□□□□ -1.98
RPL40BP0CH09 RCY1YJL204C 2523 nt2.69□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms