Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Mmp8O70138 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Mmp8O70138 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Mmp8O70138 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Mmp8O70138 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.35■■□□□ 1.33
Mmp8O70138 Gm42642-201ENSMUST00000200683 355 ntBASIC23.35■■□□□ 1.33
Mmp8O70138 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Mmp8O70138 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Mmp8O70138 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Mmp8O70138 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Mmp8O70138 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
Mmp8O70138 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.34■■□□□ 1.33
Mmp8O70138 Gm42778-201ENSMUST00000199644 553 ntBASIC23.34■■□□□ 1.33
Mmp8O70138 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Mmp8O70138 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Mmp8O70138 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Mmp8O70138 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Mmp8O70138 Gm26571-201ENSMUST00000181399 666 ntBASIC23.33■■□□□ 1.33
Mmp8O70138 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Mmp8O70138 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Mmp8O70138 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Mmp8O70138 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Mmp8O70138 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Mmp8O70138 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Gm10849-201ENSMUST00000100397 618 ntBASIC23.32■■□□□ 1.32
Mmp8O70138 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
Mmp8O70138 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Mmp8O70138 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Mmp8O70138 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Mmp8O70138 Gm13534-201ENSMUST00000121169 513 ntBASIC23.31■■□□□ 1.32
Mmp8O70138 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.31■■□□□ 1.32
Mmp8O70138 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Mmp8O70138 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Mmp8O70138 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Mmp8O70138 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Mmp8O70138 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Mmp8O70138 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Mmp8O70138 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.3■■□□□ 1.32
Mmp8O70138 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.3■■□□□ 1.32
Mmp8O70138 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Mmp8O70138 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Mmp8O70138 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Mmp8O70138 Iqck-206ENSMUST00000208658 2891 ntBASIC23.29■■□□□ 1.32
Mmp8O70138 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Mmp8O70138 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Mmp8O70138 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Mmp8O70138 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Mmp8O70138 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Mmp8O70138 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Mmp8O70138 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Mmp8O70138 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Mmp8O70138 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.28■■□□□ 1.32
Mmp8O70138 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Mmp8O70138 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Mmp8O70138 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Mmp8O70138 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Gm18671-201ENSMUST00000214826 683 ntBASIC23.27■■□□□ 1.32
Mmp8O70138 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Mmp8O70138 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mmp8O70138 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mmp8O70138 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mmp8O70138 Gm10616-201ENSMUST00000205285 2127 ntBASIC23.26■■□□□ 1.31
Mmp8O70138 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Mmp8O70138 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms