Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Rdh5O55240 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18■□□□□ 0.47
Rdh5O55240 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18■□□□□ 0.47
Rdh5O55240 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rdh5O55240 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rdh5O55240 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Rdh5O55240 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.99■□□□□ 0.47
Rdh5O55240 Gm43060-201ENSMUST00000200621 289 ntBASIC17.99■□□□□ 0.47
Rdh5O55240 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.99■□□□□ 0.47
Rdh5O55240 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh5O55240 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rdh5O55240 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rdh5O55240 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Rdh5O55240 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh5O55240 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.97■□□□□ 0.47
Rdh5O55240 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rdh5O55240 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh5O55240 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh5O55240 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rdh5O55240 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.97■□□□□ 0.47
Rdh5O55240 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.97■□□□□ 0.47
Rdh5O55240 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.97■□□□□ 0.47
Rdh5O55240 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.97■□□□□ 0.47
Rdh5O55240 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh5O55240 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh5O55240 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh5O55240 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh5O55240 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.97■□□□□ 0.47
Rdh5O55240 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh5O55240 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh5O55240 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh5O55240 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Rdh5O55240 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.96■□□□□ 0.47
Rdh5O55240 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.96■□□□□ 0.47
Rdh5O55240 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh5O55240 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh5O55240 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh5O55240 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Rdh5O55240 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rdh5O55240 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rdh5O55240 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh5O55240 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rdh5O55240 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.94■□□□□ 0.46
Rdh5O55240 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.94■□□□□ 0.46
Rdh5O55240 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.94■□□□□ 0.46
Rdh5O55240 Gm5874-201ENSMUST00000096101 508 ntBASIC17.94■□□□□ 0.46
Rdh5O55240 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rdh5O55240 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rdh5O55240 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.93■□□□□ 0.46
Rdh5O55240 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.93■□□□□ 0.46
Rdh5O55240 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rdh5O55240 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rdh5O55240 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rdh5O55240 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rdh5O55240 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rdh5O55240 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms