Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ldb2O55203 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb2O55203 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ldb2O55203 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.96■□□□□ 0.63
Ldb2O55203 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb2O55203 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb2O55203 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb2O55203 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.96■□□□□ 0.63
Ldb2O55203 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.96■□□□□ 0.63
Ldb2O55203 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb2O55203 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb2O55203 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb2O55203 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ldb2O55203 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ldb2O55203 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.95■□□□□ 0.62
Ldb2O55203 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ldb2O55203 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.95■□□□□ 0.62
Ldb2O55203 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb2O55203 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ldb2O55203 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb2O55203 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ldb2O55203 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb2O55203 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb2O55203 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ldb2O55203 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Ldb2O55203 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb2O55203 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb2O55203 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb2O55203 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb2O55203 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.93■□□□□ 0.62
Ldb2O55203 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb2O55203 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ldb2O55203 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.92■□□□□ 0.62
Ldb2O55203 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Gm38205-201ENSMUST00000192243 258 ntBASIC18.92■□□□□ 0.62
Ldb2O55203 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.92■□□□□ 0.62
Ldb2O55203 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Ldb2O55203 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb2O55203 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ldb2O55203 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb2O55203 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb2O55203 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb2O55203 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ldb2O55203 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb2O55203 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb2O55203 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ldb2O55203 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb2O55203 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb2O55203 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ldb2O55203 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ldb2O55203 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ldb2O55203 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.91■□□□□ 0.62
Ldb2O55203 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb2O55203 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb2O55203 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb2O55203 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb2O55203 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.9■□□□□ 0.62
Ldb2O55203 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb2O55203 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb2O55203 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.9■□□□□ 0.62
Ldb2O55203 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Ldb2O55203 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ldb2O55203 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb2O55203 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.9■□□□□ 0.62
Ldb2O55203 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb2O55203 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ldb2O55203 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms