Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pja1O55176 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pja1O55176 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Pja1O55176 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pja1O55176 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.1■□□□□ 0.81
Pja1O55176 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.1■□□□□ 0.81
Pja1O55176 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pja1O55176 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Pja1O55176 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pja1O55176 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pja1O55176 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pja1O55176 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pja1O55176 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Pja1O55176 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pja1O55176 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Pja1O55176 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pja1O55176 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pja1O55176 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pja1O55176 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Pja1O55176 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pja1O55176 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pja1O55176 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pja1O55176 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pja1O55176 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pja1O55176 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pja1O55176 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pja1O55176 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pja1O55176 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pja1O55176 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pja1O55176 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.07■□□□□ 0.8
Pja1O55176 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pja1O55176 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pja1O55176 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Pja1O55176 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pja1O55176 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pja1O55176 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pja1O55176 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pja1O55176 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pja1O55176 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.06■□□□□ 0.8
Pja1O55176 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pja1O55176 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pja1O55176 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pja1O55176 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.05■□□□□ 0.8
Pja1O55176 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.05■□□□□ 0.8
Pja1O55176 Spcs1-204ENSMUST00000226782 949 ntBASIC20.05■□□□□ 0.8
Pja1O55176 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Pja1O55176 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pja1O55176 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pja1O55176 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.04■□□□□ 0.8
Pja1O55176 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pja1O55176 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pja1O55176 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pja1O55176 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.04■□□□□ 0.8
Pja1O55176 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pja1O55176 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.04■□□□□ 0.8
Pja1O55176 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.04■□□□□ 0.8
Pja1O55176 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pja1O55176 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pja1O55176 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms