Protein–RNA interactions for Protein: O54915

Nr1i2, Nuclear receptor subfamily 1 group I member 2, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i2O54915 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Nr1i2O54915 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.33■■□□□ 1
Nr1i2O54915 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nr1i2O54915 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.33■■□□□ 1
Nr1i2O54915 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Nr1i2O54915 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1i2O54915 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1i2O54915 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.32■■□□□ 1
Nr1i2O54915 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1i2O54915 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1i2O54915 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1i2O54915 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Nr1i2O54915 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.32■■□□□ 1
Nr1i2O54915 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1i2O54915 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nr1i2O54915 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1i2O54915 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.31■■□□□ 1
Nr1i2O54915 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.31■■□□□ 1
Nr1i2O54915 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1i2O54915 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1i2O54915 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1i2O54915 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1i2O54915 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1i2O54915 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1i2O54915 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.31■■□□□ 1
Nr1i2O54915 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nr1i2O54915 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Nr1i2O54915 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nr1i2O54915 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nr1i2O54915 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Nr1i2O54915 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nr1i2O54915 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nr1i2O54915 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nr1i2O54915 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.29■■□□□ 1
Nr1i2O54915 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nr1i2O54915 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nr1i2O54915 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.28■■□□□ 1
Nr1i2O54915 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Nr1i2O54915 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.27■■□□□ 1
Nr1i2O54915 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1i2O54915 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.27■■□□□ 1
Nr1i2O54915 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nr1i2O54915 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nr1i2O54915 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.27■■□□□ 1
Nr1i2O54915 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.27■■□□□ 1
Nr1i2O54915 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.27■■□□□ 1
Nr1i2O54915 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1i2O54915 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1i2O54915 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Nr1i2O54915 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Nr1i2O54915 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Nr1i2O54915 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Nr1i2O54915 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.26■□□□□ 0.99
Nr1i2O54915 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Nr1i2O54915 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Nr1i2O54915 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nr1i2O54915 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nr1i2O54915 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nr1i2O54915 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nr1i2O54915 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 Gm38205-201ENSMUST00000192243 258 ntBASIC21.25■□□□□ 0.99
Nr1i2O54915 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.25■□□□□ 0.99
Nr1i2O54915 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nr1i2O54915 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms