Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDELR3O43731 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDELR3O43731 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDELR3O43731 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.93■■□□□ 1.1
KDELR3O43731 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KDELR3O43731 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDELR3O43731 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.93■■□□□ 1.1
KDELR3O43731 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.93■■□□□ 1.1
KDELR3O43731 AC005224.4-201ENST00000583262 1652 ntBASIC21.93■■□□□ 1.1
KDELR3O43731 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KDELR3O43731 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
KDELR3O43731 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDELR3O43731 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.93■■□□□ 1.1
KDELR3O43731 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KDELR3O43731 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDELR3O43731 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
KDELR3O43731 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KDELR3O43731 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KDELR3O43731 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.92■■□□□ 1.1
KDELR3O43731 TERF1P2-201ENST00000583350 1212 ntBASIC21.92■■□□□ 1.1
KDELR3O43731 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.92■■□□□ 1.1
KDELR3O43731 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.92■■□□□ 1.1
KDELR3O43731 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDELR3O43731 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.92■■□□□ 1.1
KDELR3O43731 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KDELR3O43731 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KDELR3O43731 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDELR3O43731 ECEL1P1-201ENST00000373592 1742 ntBASIC21.92■■□□□ 1.1
KDELR3O43731 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.91■■□□□ 1.1
KDELR3O43731 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.91■■□□□ 1.1
KDELR3O43731 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.91■■□□□ 1.1
KDELR3O43731 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.91■■□□□ 1.1
KDELR3O43731 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
KDELR3O43731 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
KDELR3O43731 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
KDELR3O43731 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
KDELR3O43731 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 CCDC92B-201ENST00000575506 885 ntBASIC21.91■■□□□ 1.1
KDELR3O43731 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.91■■□□□ 1.1
KDELR3O43731 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.91■■□□□ 1.1
KDELR3O43731 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.91■■□□□ 1.1
KDELR3O43731 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDELR3O43731 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KDELR3O43731 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KDELR3O43731 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KDELR3O43731 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KDELR3O43731 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.9■■□□□ 1.1
KDELR3O43731 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.9■■□□□ 1.1
KDELR3O43731 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
KDELR3O43731 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.9■■□□□ 1.1
KDELR3O43731 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.9■■□□□ 1.1
KDELR3O43731 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KDELR3O43731 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KDELR3O43731 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
KDELR3O43731 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
KDELR3O43731 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
KDELR3O43731 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
KDELR3O43731 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.89■■□□□ 1.09
KDELR3O43731 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KDELR3O43731 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KDELR3O43731 KRT18P14-201ENST00000534205 1250 ntBASIC21.89■■□□□ 1.09
KDELR3O43731 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
KDELR3O43731 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.89■■□□□ 1.09
KDELR3O43731 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.89■■□□□ 1.09
KDELR3O43731 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.89■■□□□ 1.09
KDELR3O43731 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KDELR3O43731 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
KDELR3O43731 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
KDELR3O43731 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KDELR3O43731 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KDELR3O43731 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KDELR3O43731 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KDELR3O43731 AC055733.4-201ENST00000638462 1354 ntBASIC21.88■■□□□ 1.09
KDELR3O43731 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
KDELR3O43731 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KDELR3O43731 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.88■■□□□ 1.09
KDELR3O43731 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KDELR3O43731 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.88■■□□□ 1.09
KDELR3O43731 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.88■■□□□ 1.09
KDELR3O43731 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KDELR3O43731 AL117328.2-201ENST00000624617 1940 ntBASIC21.88■■□□□ 1.09
KDELR3O43731 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KDELR3O43731 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
KDELR3O43731 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
KDELR3O43731 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KDELR3O43731 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
KDELR3O43731 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KDELR3O43731 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
KDELR3O43731 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KDELR3O43731 AC034268.1-201ENST00000441047 882 ntBASIC21.87■■□□□ 1.09
KDELR3O43731 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.87■■□□□ 1.09
KDELR3O43731 DUX4L2-201ENST00000561772 1275 ntBASIC21.87■■□□□ 1.09
KDELR3O43731 MIR5787-201ENST00000611784 55 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms