Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Efnb3O35393 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.02■□□□□ -0
Efnb3O35393 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Efnb3O35393 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Efnb3O35393 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Efnb3O35393 Grk6-206ENSMUST00000224995 2971 ntBASIC15.02■□□□□ -0
Efnb3O35393 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Efnb3O35393 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Efnb3O35393 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.02■□□□□ -0
Efnb3O35393 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Efnb3O35393 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Efnb3O35393 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Efnb3O35393 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Efnb3O35393 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.02□□□□□ -0.01
Efnb3O35393 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.02□□□□□ -0.01
Efnb3O35393 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Efnb3O35393 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Efnb3O35393 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Efnb3O35393 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Efnb3O35393 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Efnb3O35393 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Efnb3O35393 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Efnb3O35393 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Efnb3O35393 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Efnb3O35393 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.01□□□□□ -0.01
Efnb3O35393 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Efnb3O35393 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Efnb3O35393 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Efnb3O35393 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Efnb3O35393 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15□□□□□ -0.01
Efnb3O35393 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Efnb3O35393 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Efnb3O35393 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Efnb3O35393 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15□□□□□ -0.01
Efnb3O35393 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Efnb3O35393 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15□□□□□ -0.01
Efnb3O35393 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15□□□□□ -0.01
Efnb3O35393 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15□□□□□ -0.01
Efnb3O35393 Gm27045-201ENSMUST00000182145 1402 ntBASIC15□□□□□ -0.01
Efnb3O35393 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Efnb3O35393 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.99□□□□□ -0.01
Efnb3O35393 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.99□□□□□ -0.01
Efnb3O35393 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Efnb3O35393 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
Efnb3O35393 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.98□□□□□ -0.01
Efnb3O35393 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.98□□□□□ -0.01
Efnb3O35393 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Efnb3O35393 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Efnb3O35393 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Efnb3O35393 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Efnb3O35393 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.97□□□□□ -0.01
Efnb3O35393 Gm22238-201ENSMUST00000175222 88 ntBASIC14.97□□□□□ -0.01
Efnb3O35393 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.97□□□□□ -0.01
Efnb3O35393 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Efnb3O35393 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Efnb3O35393 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Efnb3O35393 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Efnb3O35393 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms