Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 MIR939-201ENST00000401314 82 ntBASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 AC099791.1-201ENST00000416440 715 ntBASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 SMUG1P1-201ENST00000590640 811 ntBASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 AC008764.7-201ENST00000593779 1081 ntBASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV5S1A1TA0A578 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV5S1A1TA0A578 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV5S1A1TA0A578 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.62■■□□□ 1.21
TCRBV5S1A1TA0A578 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV5S1A1TA0A578 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV5S1A1TA0A578 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.62■■□□□ 1.21
TCRBV5S1A1TA0A578 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV5S1A1TA0A578 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
TCRBV5S1A1TA0A578 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 SUDS3P1-201ENST00000505831 966 ntBASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 AC027682.1-201ENST00000562846 899 ntBASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 AL355001.2-201ENST00000620617 1191 ntBASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 AL136967.2-201ENST00000623968 743 ntBASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV5S1A1TA0A578 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 AC126544.1-201ENST00000580842 1059 ntBASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV5S1A1TA0A578 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 AF213884.3-201ENST00000563833 479 ntBASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 AL139246.5-201ENST00000606645 996 ntBASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TCRBV5S1A1TA0A578 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV5S1A1TA0A578 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV5S1A1TA0A578 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV5S1A1TA0A578 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.58■■□□□ 1.21
TCRBV5S1A1TA0A578 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.58■■□□□ 1.21
TCRBV5S1A1TA0A578 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
TCRBV5S1A1TA0A578 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TCRBV5S1A1TA0A578 AC007375.3-201ENST00000600936 2314 ntBASIC22.58■■□□□ 1.2
TCRBV5S1A1TA0A578 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TCRBV5S1A1TA0A578 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
TCRBV5S1A1TA0A578 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.58■■□□□ 1.2
TCRBV5S1A1TA0A578 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TCRBV5S1A1TA0A578 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.58■■□□□ 1.2
TCRBV5S1A1TA0A578 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 RASA4CP-201ENST00000424092 1398 ntBASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCRBV5S1A1TA0A578 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 AP004607.7-201ENST00000527152 1677 ntBASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCRBV5S1A1TA0A578 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms