Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13d-4A0A0G2JFX3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm15546-201ENSMUST00000122095 826 ntBASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.08□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm5812-201ENSMUST00000061073 957 ntBASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm22238-201ENSMUST00000175222 88 ntBASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm9959-201ENSMUST00000068277 390 ntBASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms