Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gm21956-201ENSMUST00000179946 522 ntBASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv19A0A0B4J1H4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv19A0A0B4J1H4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.27■□□□□ 0.03
Trbv19A0A0B4J1H4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trbv19A0A0B4J1H4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv19A0A0B4J1H4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trbv19A0A0B4J1H4 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv19A0A0B4J1H4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 BC021767-201ENSMUST00000126387 1716 ntBASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv19A0A0B4J1H4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv19A0A0B4J1H4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms