Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv5A0A0B4J1G9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.33■□□□□ 0.05
Trbv5A0A0B4J1G9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv5A0A0B4J1G9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv5A0A0B4J1G9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trbv5A0A0B4J1G9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv5A0A0B4J1G9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv5A0A0B4J1G9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm10420-201ENSMUST00000121713 882 ntBASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv5A0A0B4J1G9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv5A0A0B4J1G9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.28■□□□□ 0.04
Trbv5A0A0B4J1G9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms