Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.12■□□□□ 0.33
Trav12n-2A0A075B626 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav12n-2A0A075B626 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12n-2A0A075B626 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12n-2A0A075B626 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Gm13146-201ENSMUST00000118508 780 ntBASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12n-2A0A075B626 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav12n-2A0A075B626 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12n-2A0A075B626 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12n-2A0A075B626 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12n-2A0A075B626 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12n-2A0A075B626 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.08■□□□□ 0.32
Trav12n-2A0A075B626 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12n-2A0A075B626 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12n-2A0A075B626 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav12n-2A0A075B626 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12n-2A0A075B626 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12n-2A0A075B626 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12n-2A0A075B626 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Gm26571-201ENSMUST00000181399 666 ntBASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 AV356131-201ENSMUST00000206201 750 ntBASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12n-2A0A075B626 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Gm10849-201ENSMUST00000100397 618 ntBASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav12n-2A0A075B626 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav12n-2A0A075B626 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12n-2A0A075B626 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.05■□□□□ 0.32
Trav12n-2A0A075B626 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav12n-2A0A075B626 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms