Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 AC087742.1-201ENST00000575880 1738 ntBASIC20.36■□□□□ 0.85
CTSFQ9UBX1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 AC092437.1-201ENST00000624794 1048 ntBASIC20.36■□□□□ 0.85
CTSFQ9UBX1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.36■□□□□ 0.85
CTSFQ9UBX1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSFQ9UBX1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.35■□□□□ 0.85
CTSFQ9UBX1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSFQ9UBX1 C9orf163-202ENST00000624034 2573 ntBASIC20.35■□□□□ 0.85
CTSFQ9UBX1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSFQ9UBX1 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.35■□□□□ 0.85
CTSFQ9UBX1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.35■□□□□ 0.85
CTSFQ9UBX1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.35■□□□□ 0.85
CTSFQ9UBX1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTSFQ9UBX1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 AC004854.2-201ENST00000608450 1441 ntBASIC20.34■□□□□ 0.85
CTSFQ9UBX1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSFQ9UBX1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 LINC00526-201ENST00000581067 1875 ntBASIC20.33■□□□□ 0.85
CTSFQ9UBX1 AC005224.4-201ENST00000583262 1652 ntBASIC20.33■□□□□ 0.85
CTSFQ9UBX1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 AL137784.2-201ENST00000607332 1000 ntBASIC20.33■□□□□ 0.85
CTSFQ9UBX1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.33■□□□□ 0.85
CTSFQ9UBX1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTSFQ9UBX1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTSFQ9UBX1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.33■□□□□ 0.84
CTSFQ9UBX1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTSFQ9UBX1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSFQ9UBX1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 AP004607.4-201ENST00000530158 1459 ntBASIC20.31■□□□□ 0.84
CTSFQ9UBX1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 AC009237.3-201ENST00000393279 1427 ntBASIC20.31■□□□□ 0.84
CTSFQ9UBX1 OR7E47P-201ENST00000546390 1422 ntBASIC20.31■□□□□ 0.84
CTSFQ9UBX1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 AC079140.4-201ENST00000507448 529 ntBASIC20.31■□□□□ 0.84
CTSFQ9UBX1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTSFQ9UBX1 AC137767.1-201ENST00000602918 1920 ntBASIC20.31■□□□□ 0.84
CTSFQ9UBX1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSFQ9UBX1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CTSFQ9UBX1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
CTSFQ9UBX1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms