Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.41■□□□□ 0.7
KIAA1549Q9HCM3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 BX005040.4-201ENST00000637145 1518 ntBASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KIAA1549Q9HCM3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KIAA1549Q9HCM3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KIAA1549Q9HCM3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.39■□□□□ 0.7
KIAA1549Q9HCM3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KIAA1549Q9HCM3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.39■□□□□ 0.7
KIAA1549Q9HCM3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 AC080038.3-201ENST00000623346 1952 ntBASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 RARRES2P11-201ENST00000635158 484 ntBASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KIAA1549Q9HCM3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 AC004911.1-201ENST00000416316 871 ntBASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
KIAA1549Q9HCM3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 AC079089.2-201ENST00000531211 1277 ntBASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 OR7E47P-201ENST00000546390 1422 ntBASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 AL137784.2-201ENST00000607332 1000 ntBASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 GUSBP5-202ENST00000510805 1989 ntBASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 AC092053.2-201ENST00000640557 1818 ntBASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 AC137767.1-201ENST00000602918 1920 ntBASIC19.37■□□□□ 0.69
KIAA1549Q9HCM3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 AC004854.2-201ENST00000608450 1441 ntBASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.36■□□□□ 0.69
KIAA1549Q9HCM3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 AP004607.4-201ENST00000530158 1459 ntBASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KIAA1549Q9HCM3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 AC016769.1-201ENST00000409132 1010 ntBASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KIAA1549Q9HCM3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms