Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Etf1-202ENSMUST00000180351 108 ntBASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nop56Q9D6Z1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nop56Q9D6Z1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nop56Q9D6Z1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Nop56Q9D6Z1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 AA386476-201ENSMUST00000098781 1665 ntBASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nop56Q9D6Z1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nop56Q9D6Z1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nop56Q9D6Z1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Nop56Q9D6Z1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nop56Q9D6Z1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nop56Q9D6Z1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nop56Q9D6Z1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.63■□□□□ 0.73
Nop56Q9D6Z1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nop56Q9D6Z1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nop56Q9D6Z1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nop56Q9D6Z1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.63■□□□□ 0.73
Nop56Q9D6Z1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nop56Q9D6Z1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms